Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN1P35523 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN1P35523 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN1P35523 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.79■□□□□ 0.6
CLCN1P35523 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 AC122714.2-201ENST00000502787 707 ntBASIC18.79■□□□□ 0.6
CLCN1P35523 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 AP002414.4-201ENST00000589764 1148 ntBASIC18.79■□□□□ 0.6
CLCN1P35523 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLCN1P35523 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.79■□□□□ 0.6
CLCN1P35523 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN1P35523 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.79■□□□□ 0.6
CLCN1P35523 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLCN1P35523 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCN1P35523 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CLCN1P35523 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLCN1P35523 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 AL049757.1-201ENST00000616842 1596 ntBASIC18.78■□□□□ 0.6
CLCN1P35523 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLCN1P35523 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
CLCN1P35523 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCN1P35523 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCN1P35523 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.78■□□□□ 0.6
CLCN1P35523 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.78■□□□□ 0.6
CLCN1P35523 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.78■□□□□ 0.6
CLCN1P35523 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 AC010331.1-201ENST00000611423 582 ntBASIC18.78■□□□□ 0.6
CLCN1P35523 NPAP1P7-201ENST00000613027 823 ntBASIC18.78■□□□□ 0.6
CLCN1P35523 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.78■□□□□ 0.6
CLCN1P35523 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN1P35523 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLCN1P35523 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLCN1P35523 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLCN1P35523 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.77■□□□□ 0.6
CLCN1P35523 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 LINC00552-201ENST00000625151 2579 ntBASIC18.77■□□□□ 0.6
CLCN1P35523 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLCN1P35523 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.77■□□□□ 0.6
CLCN1P35523 ARMC10P1-201ENST00000313754 855 ntBASIC18.77■□□□□ 0.6
CLCN1P35523 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLCN1P35523 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLCN1P35523 AC026396.1-201ENST00000419388 421 ntBASIC18.77■□□□□ 0.6
CLCN1P35523 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms