Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC13P31276 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC13P31276 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC13P31276 KRT8P23-201ENST00000560090 1207 ntBASIC16.97■□□□□ 0.31
HOXC13P31276 AL596325.1-201ENST00000563991 1082 ntBASIC16.97■□□□□ 0.31
HOXC13P31276 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC13P31276 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC13P31276 AL662799.1-202ENST00000614205 422 ntBASIC16.97■□□□□ 0.31
HOXC13P31276 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC13P31276 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC13P31276 AC005052.1-201ENST00000625181 2492 ntBASIC16.97■□□□□ 0.31
HOXC13P31276 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC13P31276 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC13P31276 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HOXC13P31276 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC13P31276 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 MIR346-201ENST00000362234 95 ntBASIC16.96■□□□□ 0.31
HOXC13P31276 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC13P31276 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC13P31276 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HOXC13P31276 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC13P31276 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC13P31276 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 SPDYE22P-201ENST00000582158 798 ntBASIC16.96■□□□□ 0.31
HOXC13P31276 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC13P31276 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
HOXC13P31276 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC13P31276 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HOXC13P31276 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC13P31276 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
HOXC13P31276 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.96■□□□□ 0.3
HOXC13P31276 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
HOXC13P31276 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.96■□□□□ 0.3
HOXC13P31276 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.96■□□□□ 0.3
HOXC13P31276 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC13P31276 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HOXC13P31276 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.96■□□□□ 0.3
HOXC13P31276 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 AC099398.1-201ENST00000567919 2776 ntBASIC16.95■□□□□ 0.3
HOXC13P31276 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXC13P31276 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.95■□□□□ 0.3
HOXC13P31276 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 SPDYE7P-202ENST00000420373 878 ntBASIC16.95■□□□□ 0.3
HOXC13P31276 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.95■□□□□ 0.3
HOXC13P31276 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 AL590560.3-201ENST00000623350 461 ntBASIC16.95■□□□□ 0.3
HOXC13P31276 AC008267.7-201ENST00000624570 1194 ntBASIC16.95■□□□□ 0.3
HOXC13P31276 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HOXC13P31276 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms