Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN6P29350 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN6P29350 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 AC112504.1-201ENST00000623415 1841 ntBASIC15.66■□□□□ 0.1
PTPN6P29350 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN6P29350 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PTPN6P29350 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN6P29350 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PTPN6P29350 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN6P29350 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PTPN6P29350 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 AC108073.2-201ENST00000464002 357 ntBASIC15.65■□□□□ 0.1
PTPN6P29350 KRT18P58-201ENST00000527480 1120 ntBASIC15.65■□□□□ 0.1
PTPN6P29350 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN6P29350 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN6P29350 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN6P29350 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN6P29350 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN6P29350 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN6P29350 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN6P29350 CDC14C-201ENST00000428251 1719 ntBASIC15.64■□□□□ 0.09
PTPN6P29350 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN6P29350 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN6P29350 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 AC005412.3-201ENST00000580309 715 ntBASIC15.64■□□□□ 0.09
PTPN6P29350 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 AL596257.1-201ENST00000641463 2694 ntBASIC15.64■□□□□ 0.09
PTPN6P29350 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN6P29350 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.64■□□□□ 0.09
PTPN6P29350 AC092384.3-202ENST00000564646 2873 ntBASIC15.64■□□□□ 0.09
PTPN6P29350 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTPN6P29350 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN6P29350 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms