Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 AC003669.1-201ENST00000334569 611 ntBASIC13.98□□□□□ -0.17
VAMP1P23763 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 FAM220CP-201ENST00000395253 831 ntBASIC13.98□□□□□ -0.17
VAMP1P23763 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.98□□□□□ -0.17
VAMP1P23763 KLF4P1-201ENST00000412782 1185 ntBASIC13.98□□□□□ -0.17
VAMP1P23763 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.98□□□□□ -0.17
VAMP1P23763 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
VAMP1P23763 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.98□□□□□ -0.17
VAMP1P23763 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.98□□□□□ -0.17
VAMP1P23763 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VAMP1P23763 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.98□□□□□ -0.17
VAMP1P23763 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAMP1P23763 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.98□□□□□ -0.17
VAMP1P23763 AP003680.1-201ENST00000598970 3660 ntBASIC13.97□□□□□ -0.17
VAMP1P23763 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 PRORSD1P-201ENST00000295112 541 ntBASIC13.97□□□□□ -0.17
VAMP1P23763 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.97□□□□□ -0.17
VAMP1P23763 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 AL353593.2-201ENST00000602529 1483 ntBASIC13.97□□□□□ -0.17
VAMP1P23763 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VAMP1P23763 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.97□□□□□ -0.17
VAMP1P23763 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAMP1P23763 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.97□□□□□ -0.17
VAMP1P23763 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.96□□□□□ -0.17
VAMP1P23763 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VAMP1P23763 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.96□□□□□ -0.17
VAMP1P23763 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.96□□□□□ -0.17
VAMP1P23763 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms