Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGB4P16144 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGB4P16144 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGB4P16144 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.68■□□□□ 0.9
ITGB4P16144 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ITGB4P16144 AC012441.1-201ENST00000446669 685 ntBASIC20.68■□□□□ 0.9
ITGB4P16144 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGB4P16144 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGB4P16144 MIR6869-201ENST00000619434 62 ntBASIC20.68■□□□□ 0.9
ITGB4P16144 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGB4P16144 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGB4P16144 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGB4P16144 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ITGB4P16144 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGB4P16144 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.68■□□□□ 0.9
ITGB4P16144 MSTO2P-201ENST00000314835 1709 ntBASIC20.68■□□□□ 0.9
ITGB4P16144 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ITGB4P16144 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
ITGB4P16144 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITGB4P16144 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.68■□□□□ 0.9
ITGB4P16144 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITGB4P16144 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGB4P16144 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 AC004987.2-201ENST00000395959 1148 ntBASIC20.67■□□□□ 0.9
ITGB4P16144 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGB4P16144 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.67■□□□□ 0.9
ITGB4P16144 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGB4P16144 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGB4P16144 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ITGB4P16144 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.67■□□□□ 0.9
ITGB4P16144 KRT90P-201ENST00000549264 1064 ntBASIC20.67■□□□□ 0.9
ITGB4P16144 DUX4L45-201ENST00000566406 1057 ntBASIC20.67■□□□□ 0.9
ITGB4P16144 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
ITGB4P16144 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
ITGB4P16144 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
ITGB4P16144 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 BRWD1P1-201ENST00000401091 371 ntBASIC20.67■□□□□ 0.9
ITGB4P16144 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGB4P16144 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.67■□□□□ 0.9
ITGB4P16144 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 RN7SL219P-201ENST00000582872 296 ntBASIC20.67■□□□□ 0.9
ITGB4P16144 BTNL10-201ENST00000595971 695 ntBASIC20.67■□□□□ 0.9
ITGB4P16144 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITGB4P16144 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.67■□□□□ 0.9
ITGB4P16144 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ITGB4P16144 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ITGB4P16144 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGB4P16144 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ITGB4P16144 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ITGB4P16144 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGB4P16144 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
ITGB4P16144 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ITGB4P16144 AC007613.1-201ENST00000572811 2597 ntBASIC20.66■□□□□ 0.9
ITGB4P16144 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ITGB4P16144 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGB4P16144 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ITGB4P16144 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGB4P16144 ACTG1P3-201ENST00000431775 1114 ntBASIC20.66■□□□□ 0.9
ITGB4P16144 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.66■□□□□ 0.9
ITGB4P16144 ACTBP11-201ENST00000436287 1126 ntBASIC20.66■□□□□ 0.9
ITGB4P16144 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGB4P16144 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.66■□□□□ 0.9
ITGB4P16144 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.66■□□□□ 0.9
ITGB4P16144 AL133373.2-201ENST00000623187 2828 ntBASIC20.66■□□□□ 0.9
ITGB4P16144 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGB4P16144 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.66■□□□□ 0.9
ITGB4P16144 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ITGB4P16144 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ITGB4P16144 BNIP3P1-202ENST00000550043 1585 ntBASIC20.65■□□□□ 0.9
ITGB4P16144 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
ITGB4P16144 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.65■□□□□ 0.9
ITGB4P16144 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGB4P16144 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
ITGB4P16144 AC020907.1-201ENST00000616460 1350 ntBASIC20.65■□□□□ 0.9
ITGB4P16144 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ITGB4P16144 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGB4P16144 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGB4P16144 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.65■□□□□ 0.9
ITGB4P16144 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ITGB4P16144 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ITGB4P16144 AC005252.2-201ENST00000624630 1141 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms