Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CYP3A4P08684 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.4■□□□□ 0.54
CYP3A4P08684 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.4■□□□□ 0.54
CYP3A4P08684 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CYP3A4P08684 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.4■□□□□ 0.54
CYP3A4P08684 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.4■□□□□ 0.54
CYP3A4P08684 MIR943-201ENST00000401286 94 ntBASIC18.4■□□□□ 0.54
CYP3A4P08684 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 HLA-V-204ENST00000476601 1289 ntBASIC18.4■□□□□ 0.54
CYP3A4P08684 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.4■□□□□ 0.54
CYP3A4P08684 AC026979.3-201ENST00000607315 403 ntBASIC18.4■□□□□ 0.54
CYP3A4P08684 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.4■□□□□ 0.54
CYP3A4P08684 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 FO538757.1-201ENST00000623083 1397 ntBASIC18.4■□□□□ 0.54
CYP3A4P08684 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 OR6D1P-202ENST00000641007 5290 ntBASIC18.4■□□□□ 0.54
CYP3A4P08684 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.4■□□□□ 0.54
CYP3A4P08684 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.4■□□□□ 0.54
CYP3A4P08684 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CYP3A4P08684 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CYP3A4P08684 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.39■□□□□ 0.54
CYP3A4P08684 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CYP3A4P08684 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CYP3A4P08684 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CYP3A4P08684 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
CYP3A4P08684 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.39■□□□□ 0.53
CYP3A4P08684 MIR770-201ENST00000390219 98 ntBASIC18.39■□□□□ 0.53
CYP3A4P08684 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.39■□□□□ 0.53
CYP3A4P08684 TREML5P-201ENST00000421694 576 ntBASIC18.39■□□□□ 0.53
CYP3A4P08684 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.39■□□□□ 0.53
CYP3A4P08684 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.39■□□□□ 0.53
CYP3A4P08684 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.39■□□□□ 0.53
CYP3A4P08684 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.39■□□□□ 0.53
CYP3A4P08684 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.39■□□□□ 0.53
CYP3A4P08684 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.39■□□□□ 0.53
CYP3A4P08684 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CYP3A4P08684 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.39■□□□□ 0.53
CYP3A4P08684 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYP3A4P08684 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 AC006449.6-201ENST00000612330 2296 ntBASIC18.38■□□□□ 0.53
CYP3A4P08684 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 SPDYE17-201ENST00000412399 783 ntBASIC18.38■□□□□ 0.53
CYP3A4P08684 AL139010.1-201ENST00000454878 894 ntBASIC18.38■□□□□ 0.53
CYP3A4P08684 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.38■□□□□ 0.53
CYP3A4P08684 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.38■□□□□ 0.53
CYP3A4P08684 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.38■□□□□ 0.53
CYP3A4P08684 AC073592.8-201ENST00000624126 511 ntBASIC18.38■□□□□ 0.53
CYP3A4P08684 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.38■□□□□ 0.53
CYP3A4P08684 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CYP3A4P08684 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CYP3A4P08684 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 MTHFR-217ENST00000641820 1569 ntBASIC18.38■□□□□ 0.53
CYP3A4P08684 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CYP3A4P08684 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.38■□□□□ 0.53
CYP3A4P08684 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms