Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 SCARNA20.5-201ENST00000516991 142 ntBASIC24.23■■□□□ 1.47
RAPGEF3O95398 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 RERG-209ENST00000546331 1383 ntTSL 2 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 KRT8P19-201ENST00000551916 1455 ntBASIC24.23■■□□□ 1.47
RAPGEF3O95398 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 AL138688.1-201ENST00000624851 1594 ntBASIC24.23■■□□□ 1.47
RAPGEF3O95398 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RAPGEF3O95398 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 BOC-212ENST00000485230 2173 ntTSL 2 BASIC24.23■■□□□ 1.47
RAPGEF3O95398 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 KRT18P64-201ENST00000434946 1219 ntBASIC24.22■■□□□ 1.47
RAPGEF3O95398 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 AC023310.1-201ENST00000554836 735 ntBASIC24.22■■□□□ 1.47
RAPGEF3O95398 AP006547.1-201ENST00000563435 692 ntBASIC24.22■■□□□ 1.47
RAPGEF3O95398 MIR4321-201ENST00000592276 80 ntBASIC24.22■■□□□ 1.47
RAPGEF3O95398 SPCS2P2-201ENST00000603270 608 ntBASIC24.22■■□□□ 1.47
RAPGEF3O95398 METTL26-214ENST00000614890 801 ntTSL 3 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 LARP4-220ENST00000615080 856 ntTSL 5 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 AC128714.1-201ENST00000637035 887 ntBASIC24.22■■□□□ 1.47
RAPGEF3O95398 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RAPGEF3O95398 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC24.22■■□□□ 1.47
RAPGEF3O95398 U82695.1-201ENST00000635752 1889 ntBASIC24.21■■□□□ 1.47
RAPGEF3O95398 GGT4P-201ENST00000623672 1708 ntBASIC24.21■■□□□ 1.47
RAPGEF3O95398 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 TARDBPP1-201ENST00000442013 1203 ntBASIC24.21■■□□□ 1.47
RAPGEF3O95398 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 RERG-205ENST00000537647 935 ntTSL 2 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 HNRNPA1P48-202ENST00000565308 961 ntBASIC24.21■■□□□ 1.47
RAPGEF3O95398 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 MIR4741-201ENST00000579822 90 ntBASIC24.21■■□□□ 1.47
RAPGEF3O95398 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC24.21■■□□□ 1.47
RAPGEF3O95398 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 AC004408.2-201ENST00000623613 2777 ntBASIC24.21■■□□□ 1.47
RAPGEF3O95398 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RAPGEF3O95398 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
RAPGEF3O95398 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC24.2■■□□□ 1.47
RAPGEF3O95398 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
RAPGEF3O95398 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AL391256.1-201ENST00000443260 1855 ntBASIC24.2■■□□□ 1.46
RAPGEF3O95398 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF3O95398 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC004898.1-201ENST00000451057 766 ntBASIC24.2■■□□□ 1.46
RAPGEF3O95398 RPS2P36-201ENST00000456516 831 ntBASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC091804.1-201ENST00000486888 567 ntBASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC24.2■■□□□ 1.46
RAPGEF3O95398 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms