Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 AC022188.1-201ENST00000620960 1664 ntBASIC18.31■□□□□ 0.52
CLSTN1O94985 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.31■□□□□ 0.52
CLSTN1O94985 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.31■□□□□ 0.52
CLSTN1O94985 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.31■□□□□ 0.52
CLSTN1O94985 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.31■□□□□ 0.52
CLSTN1O94985 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.31■□□□□ 0.52
CLSTN1O94985 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 IGHV3-65-201ENST00000523210 341 ntBASIC18.31■□□□□ 0.52
CLSTN1O94985 AC124947.2-201ENST00000547118 1133 ntBASIC18.31■□□□□ 0.52
CLSTN1O94985 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.31■□□□□ 0.52
CLSTN1O94985 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
CLSTN1O94985 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.31■□□□□ 0.52
CLSTN1O94985 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.31■□□□□ 0.52
CLSTN1O94985 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CLSTN1O94985 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 FLJ38576-201ENST00000623820 2459 ntBASIC18.31■□□□□ 0.52
CLSTN1O94985 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.31■□□□□ 0.52
CLSTN1O94985 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLSTN1O94985 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.31■□□□□ 0.52
CLSTN1O94985 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLSTN1O94985 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.3■□□□□ 0.52
CLSTN1O94985 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLSTN1O94985 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.3■□□□□ 0.52
CLSTN1O94985 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.3■□□□□ 0.52
CLSTN1O94985 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.3■□□□□ 0.52
CLSTN1O94985 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLSTN1O94985 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLSTN1O94985 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLSTN1O94985 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLSTN1O94985 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 TUBB8P12-201ENST00000308911 1335 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 TUBB7P-202ENST00000428444 1305 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 TUBB8P7-204ENST00000567960 1332 ntBASIC18.29■□□□□ 0.52
CLSTN1O94985 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.29■□□□□ 0.52
CLSTN1O94985 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLSTN1O94985 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.29■□□□□ 0.52
CLSTN1O94985 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.29■□□□□ 0.52
CLSTN1O94985 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLSTN1O94985 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms