Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 CD276-203ENST00000537340 2439 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 AC120498.9-201ENST00000339021 3867 ntBASIC7.2□□□□□ -1.26
USH2AO75445 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 GUK1-206ENST00000366723 845 ntTSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 AGPAT5P1-201ENST00000455855 1019 ntBASIC7.2□□□□□ -1.26
USH2AO75445 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 HKR1-225ENST00000592168 566 ntTSL 4 BASIC7.2□□□□□ -1.26
USH2AO75445 LINC01115-203ENST00000606068 577 ntBASIC7.2□□□□□ -1.26
USH2AO75445 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC7.2□□□□□ -1.26
USH2AO75445 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 POM121L10P-201ENST00000436994 1285 ntBASIC7.2□□□□□ -1.26
USH2AO75445 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 AC145423.3-201ENST00000615987 467 ntBASIC7.2□□□□□ -1.26
USH2AO75445 MIR6069-201ENST00000620069 79 ntBASIC7.2□□□□□ -1.26
USH2AO75445 AP001350.2-201ENST00000625104 1094 ntBASIC7.2□□□□□ -1.26
USH2AO75445 Z97205.2-201ENST00000564697 1639 ntBASIC7.2□□□□□ -1.26
USH2AO75445 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 INTS4P2-202ENST00000614726 2019 ntBASIC7.2□□□□□ -1.26
USH2AO75445 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 AL355312.1-201ENST00000407115 2176 ntBASIC7.2□□□□□ -1.26
USH2AO75445 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 RPSAP31-201ENST00000416648 895 ntBASIC7.2□□□□□ -1.26
USH2AO75445 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 AL596276.2-201ENST00000447525 331 ntBASIC7.2□□□□□ -1.26
USH2AO75445 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 AC135050.7-201ENST00000624508 2218 ntBASIC7.2□□□□□ -1.26
USH2AO75445 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USH2AO75445 CEP164P1-201ENST00000455142 418 ntBASIC7.2□□□□□ -1.26
USH2AO75445 CTBP2P4-201ENST00000513884 920 ntBASIC7.2□□□□□ -1.26
USH2AO75445 NPM1P43-201ENST00000558669 786 ntBASIC7.2□□□□□ -1.26
USH2AO75445 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC7.2□□□□□ -1.26
USH2AO75445 AC127024.7-201ENST00000625101 200 ntBASIC7.2□□□□□ -1.26
USH2AO75445 AL139011.1-202ENST00000642063 584 ntBASIC7.2□□□□□ -1.26
USH2AO75445 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
USH2AO75445 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC7.2□□□□□ -1.26
USH2AO75445 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 BRF1-202ENST00000379932 884 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms