Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 KRT18P34-201ENST00000488218 1270 ntBASIC15.82■□□□□ 0.12
PRAMEF4O60810 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 AL138918.1-201ENST00000568306 659 ntBASIC15.82■□□□□ 0.12
PRAMEF4O60810 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF4O60810 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF4O60810 AC132872.4-202ENST00000622924 2756 ntBASIC15.81■□□□□ 0.12
PRAMEF4O60810 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 WASH6P-202ENST00000359512 1437 ntBASIC15.81■□□□□ 0.12
PRAMEF4O60810 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 AC091812.2-201ENST00000619081 385 ntBASIC15.81■□□□□ 0.12
PRAMEF4O60810 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 AC092902.6-201ENST00000641783 218 ntBASIC15.81■□□□□ 0.12
PRAMEF4O60810 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF4O60810 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
PRAMEF4O60810 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 ADH5P3-201ENST00000433842 1137 ntBASIC15.8■□□□□ 0.12
PRAMEF4O60810 KRT18P58-201ENST00000527480 1120 ntBASIC15.8■□□□□ 0.12
PRAMEF4O60810 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF4O60810 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
PRAMEF4O60810 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms