Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC3O60481 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ZIC3O60481 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
ZIC3O60481 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC3O60481 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ZIC3O60481 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.77□□□□□ -0.04
ZIC3O60481 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZIC3O60481 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
ZIC3O60481 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
ZIC3O60481 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC3O60481 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.77□□□□□ -0.04
ZIC3O60481 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ZIC3O60481 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.77□□□□□ -0.05
ZIC3O60481 RNA5SP410-201ENST00000516285 106 ntBASIC14.77□□□□□ -0.05
ZIC3O60481 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
ZIC3O60481 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.77□□□□□ -0.05
ZIC3O60481 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ZIC3O60481 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
ZIC3O60481 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.77□□□□□ -0.05
ZIC3O60481 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC3O60481 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ZIC3O60481 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 CNN2P2-201ENST00000443536 909 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.76□□□□□ -0.05
ZIC3O60481 CNN2P3-201ENST00000450201 906 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
ZIC3O60481 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.76□□□□□ -0.05
ZIC3O60481 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC3O60481 AC051619.7-201ENST00000568314 623 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 AC061975.2-201ENST00000581722 295 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC3O60481 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC3O60481 AC106028.4-201ENST00000614509 607 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 MIR6080-201ENST00000617359 66 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 AL136317.3-201ENST00000618497 906 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 AL592424.1-201ENST00000563624 1536 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 REXO1L8P-201ENST00000604378 1897 ntBASIC14.76□□□□□ -0.05
ZIC3O60481 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC3O60481 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ZIC3O60481 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC3O60481 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC3O60481 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZIC3O60481 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC3O60481 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms