Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
XRCC2O43543 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.37□□□□□ -0.11
XRCC2O43543 AC079776.4-201ENST00000511039 504 ntBASIC14.37□□□□□ -0.11
XRCC2O43543 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.37□□□□□ -0.11
XRCC2O43543 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.37□□□□□ -0.11
XRCC2O43543 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.37□□□□□ -0.11
XRCC2O43543 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 HLA-A-201ENST00000376802 1334 ntBASIC14.37□□□□□ -0.11
XRCC2O43543 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
XRCC2O43543 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
XRCC2O43543 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
XRCC2O43543 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 RNU1-129P-201ENST00000384064 167 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 PMS2P4-201ENST00000412466 1052 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 AC009078.2-202ENST00000463353 338 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.36□□□□□ -0.11
XRCC2O43543 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.36□□□□□ -0.11
XRCC2O43543 AC096734.2-201ENST00000562054 433 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 U1.21-201ENST00000580816 167 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.36□□□□□ -0.11
XRCC2O43543 AL031055.1-201ENST00000606362 631 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 Z83851.2-201ENST00000609564 659 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 AC007064.4-201ENST00000637740 555 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.36□□□□□ -0.11
XRCC2O43543 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
XRCC2O43543 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
XRCC2O43543 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 AL662844.4-201ENST00000606367 2838 ntBASIC14.36□□□□□ -0.11
XRCC2O43543 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
XRCC2O43543 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XRCC2O43543 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.35□□□□□ -0.11
XRCC2O43543 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.35□□□□□ -0.11
XRCC2O43543 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
XRCC2O43543 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XRCC2O43543 HMGA1P7-201ENST00000406908 502 ntBASIC14.35□□□□□ -0.11
XRCC2O43543 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
XRCC2O43543 HCG4B-203ENST00000450128 991 ntBASIC14.35□□□□□ -0.11
XRCC2O43543 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
XRCC2O43543 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms