Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
PER1O15534 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.14■■□□□ 1.13
PER1O15534 SPDYE17-201ENST00000412399 783 ntBASIC22.14■■□□□ 1.13
PER1O15534 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PER1O15534 PAM16-215ENST00000577031 548 ntTSL 4 BASIC22.14■■□□□ 1.13
PER1O15534 MIR6080-201ENST00000617359 66 ntBASIC22.14■■□□□ 1.13
PER1O15534 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.14■■□□□ 1.13
PER1O15534 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
PER1O15534 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PER1O15534 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC22.14■■□□□ 1.13
PER1O15534 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC22.14■■□□□ 1.13
PER1O15534 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PER1O15534 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PER1O15534 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 DOC2GP-204ENST00000639052 2548 ntBASIC22.13■■□□□ 1.13
PER1O15534 AC024909.3-201ENST00000611513 2257 ntBASIC22.13■■□□□ 1.13
PER1O15534 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.13■■□□□ 1.13
PER1O15534 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.13■■□□□ 1.13
PER1O15534 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
PER1O15534 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 SATB1-217ENST00000493952 626 ntTSL 3 BASIC22.13■■□□□ 1.13
PER1O15534 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.13■■□□□ 1.13
PER1O15534 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PER1O15534 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
PER1O15534 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC22.12■■□□□ 1.13
PER1O15534 AC069224.1-201ENST00000566372 1715 ntBASIC22.12■■□□□ 1.13
PER1O15534 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.12■■□□□ 1.13
PER1O15534 AC092580.3-201ENST00000430932 139 ntBASIC22.12■■□□□ 1.13
PER1O15534 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 DUX4L27-201ENST00000554796 1261 ntBASIC22.12■■□□□ 1.13
PER1O15534 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.12■■□□□ 1.13
PER1O15534 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.12■■□□□ 1.13
PER1O15534 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.12■■□□□ 1.13
PER1O15534 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 AC003101.2-201ENST00000612557 442 ntBASIC22.12■■□□□ 1.13
PER1O15534 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 AC112504.1-201ENST00000623415 1841 ntBASIC22.12■■□□□ 1.13
PER1O15534 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC22.12■■□□□ 1.13
PER1O15534 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PER1O15534 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.12■■□□□ 1.13
PER1O15534 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC22.11■■□□□ 1.13
PER1O15534 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PER1O15534 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC22.11■■□□□ 1.13
PER1O15534 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
PER1O15534 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
PER1O15534 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC22.11■■□□□ 1.13
PER1O15534 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.11■■□□□ 1.13
PER1O15534 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PER1O15534 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PER1O15534 MIR648-201ENST00000385046 94 ntBASIC22.11■■□□□ 1.13
PER1O15534 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.11■■□□□ 1.13
PER1O15534 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PER1O15534 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms