Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 HLA-A-201ENST00000376802 1334 ntBASIC16.54■□□□□ 0.24
PFDN6O15212 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PFDN6O15212 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN6O15212 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PFDN6O15212 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.54■□□□□ 0.24
PFDN6O15212 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 AC096734.2-201ENST00000562054 433 ntBASIC16.54■□□□□ 0.24
PFDN6O15212 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.54■□□□□ 0.24
PFDN6O15212 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.54■□□□□ 0.24
PFDN6O15212 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.54■□□□□ 0.24
PFDN6O15212 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PFDN6O15212 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PFDN6O15212 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PFDN6O15212 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PFDN6O15212 AC006449.5-201ENST00000610658 2098 ntBASIC16.54■□□□□ 0.24
PFDN6O15212 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 GGT4P-201ENST00000623672 1708 ntBASIC16.53■□□□□ 0.24
PFDN6O15212 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.53■□□□□ 0.24
PFDN6O15212 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.53■□□□□ 0.24
PFDN6O15212 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 ALOX12P2-203ENST00000570921 1945 ntBASIC16.53■□□□□ 0.24
PFDN6O15212 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.53■□□□□ 0.24
PFDN6O15212 RNA5SP419-201ENST00000515908 135 ntBASIC16.53■□□□□ 0.24
PFDN6O15212 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
PFDN6O15212 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.53■□□□□ 0.24
PFDN6O15212 AC023141.13-201ENST00000604991 943 ntBASIC16.53■□□□□ 0.24
PFDN6O15212 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
PFDN6O15212 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
PFDN6O15212 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.53■□□□□ 0.24
PFDN6O15212 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PFDN6O15212 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PFDN6O15212 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PFDN6O15212 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PFDN6O15212 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.52■□□□□ 0.24
PFDN6O15212 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.52■□□□□ 0.24
PFDN6O15212 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PFDN6O15212 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.52■□□□□ 0.24
PFDN6O15212 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.52■□□□□ 0.24
PFDN6O15212 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.52■□□□□ 0.24
PFDN6O15212 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.52■□□□□ 0.24
PFDN6O15212 AC009078.2-202ENST00000463353 338 ntBASIC16.52■□□□□ 0.24
PFDN6O15212 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PFDN6O15212 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms