Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDH17O14917 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCDH17O14917 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.76■□□□□ 0.11
PCDH17O14917 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 AC004835.2-201ENST00000603762 682 ntBASIC15.76■□□□□ 0.11
PCDH17O14917 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDH17O14917 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH17O14917 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDH17O14917 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PCDH17O14917 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDH17O14917 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PCDH17O14917 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH17O14917 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCDH17O14917 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 HMGA1P7-201ENST00000406908 502 ntBASIC15.75■□□□□ 0.11
PCDH17O14917 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.75■□□□□ 0.11
PCDH17O14917 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDH17O14917 MPDU1-223ENST00000582151 728 ntBASIC15.75■□□□□ 0.11
PCDH17O14917 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 AL513210.1-201ENST00000629608 234 ntBASIC15.75■□□□□ 0.11
PCDH17O14917 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PCDH17O14917 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH17O14917 MST1L-201ENST00000442552 2185 ntBASIC15.75■□□□□ 0.11
PCDH17O14917 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PCDH17O14917 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDH17O14917 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH17O14917 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDH17O14917 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH17O14917 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH17O14917 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 AL391256.1-201ENST00000443260 1855 ntBASIC15.74■□□□□ 0.11
PCDH17O14917 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDH17O14917 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
PCDH17O14917 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDH17O14917 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDH17O14917 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PCDH17O14917 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDH17O14917 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDH17O14917 AP002490.2-201ENST00000524791 560 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms