Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM3A6NNA2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 C20orf181-201ENST00000623918 480 ntBASIC17.11■□□□□ 0.33
SRRM3A6NNA2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 TCAF2P1-201ENST00000291129 2421 ntBASIC17.11■□□□□ 0.33
SRRM3A6NNA2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM3A6NNA2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 TSPY26P-202ENST00000565928 3884 ntBASIC17.1■□□□□ 0.33
SRRM3A6NNA2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 PRSS29P-201ENST00000440800 595 ntBASIC17.1■□□□□ 0.33
SRRM3A6NNA2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM3A6NNA2 AC093512.1-201ENST00000617969 520 ntBASIC17.1■□□□□ 0.33
SRRM3A6NNA2 AC107918.4-202ENST00000641623 219 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms