Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 KRT18P65-201ENST00000439811 1286 ntBASIC15.33■□□□□ 0.04
CCDC160A6NGH7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 AL050303.2-201ENST00000619798 666 ntBASIC15.33■□□□□ 0.04
CCDC160A6NGH7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 AC002310.6-201ENST00000624451 1377 ntBASIC15.33■□□□□ 0.04
CCDC160A6NGH7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC160A6NGH7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 LINC00552-201ENST00000625151 2579 ntBASIC15.32■□□□□ 0.04
CCDC160A6NGH7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 AC026396.1-201ENST00000419388 421 ntBASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 AC112497.1-201ENST00000624824 639 ntBASIC15.32■□□□□ 0.04
CCDC160A6NGH7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC160A6NGH7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCDC160A6NGH7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms