Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 MRPS18AP1-201ENST00000414458 589 ntBASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 TSSK5P-201ENST00000423978 907 ntBASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC024267.1-201ENST00000582320 895 ntBASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 AC005915.1-201ENST00000624912 2018 ntBASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.35■□□□□ 0.21
TBC1D3FA6NER0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC006538.1-201ENST00000567905 1585 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AP001094.4-201ENST00000579008 2176 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 SERBP1P5-201ENST00000510079 1181 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC239800.4-201ENST00000603712 296 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AF228730.6-201ENST00000641497 218 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC084121.3-201ENST00000641716 218 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AC105233.6-201ENST00000642093 218 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 AL589702.1-201ENST00000641229 1509 ntBASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.34■□□□□ 0.21
TBC1D3FA6NER0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TBC1D3FA6NER0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms