Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 FAM197Y3-203ENST00000618346 717 ntBASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 MTHFR-217ENST00000641820 1569 ntBASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC162PA2VCL2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 AC026691.1-201ENST00000602502 2017 ntBASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 AC092474.2-201ENST00000424288 719 ntBASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 POU5F1P6-201ENST00000466990 990 ntBASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 AC109635.5-201ENST00000533593 962 ntBASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 PDPK2P-202ENST00000562415 1191 ntBASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC162PA2VCL2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC162PA2VCL2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms