Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 AC108751.1-201ENST00000490852 363 ntBASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 AL160237.2-201ENST00000556165 472 ntBASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 MIR4751-201ENST00000578027 74 ntBASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 AL031055.1-201ENST00000606362 631 ntBASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV7S3A2A0A539 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 RPS2P28-201ENST00000314255 741 ntBASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 AC098831.1-202ENST00000438821 336 ntBASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 AP002469.2-201ENST00000531724 424 ntBASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 AC144831.1-201ENST00000573312 2656 ntBASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV7S3A2A0A539 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 PRSS29P-201ENST00000440800 595 ntBASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 RNA5SP419-201ENST00000515908 135 ntBASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AC116407.3-201ENST00000623905 1129 ntBASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AC011270.2-201ENST00000624293 2550 ntBASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV7S3A2A0A539 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV7S3A2A0A539 AP003680.1-201ENST00000598970 3660 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms