Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 AC106795.1-205ENST00000512851 1056 ntBASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
AP4B1Q9Y6B7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 FRMD8P1-201ENST00000440433 1524 ntBASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 EMBP1-201ENST00000458200 901 ntBASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP4B1Q9Y6B7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 AP005117.1-201ENST00000584346 1413 ntBASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 AKR1C7P-201ENST00000305623 895 ntBASIC15.89■□□□□ 0.13
AP4B1Q9Y6B7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms