Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 SNX29P1-201ENST00000548357 1007 ntBASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC025048.3-201ENST00000590609 569 ntBASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC133552.6-201ENST00000613406 534 ntBASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC005702.4-201ENST00000618393 416 ntBASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AL033527.5-201ENST00000641382 801 ntBASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 CDC14C-201ENST00000428251 1719 ntBASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HCFC2Q9Y5Z7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 AC139713.2-201ENST00000641328 2723 ntBASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HCFC2Q9Y5Z7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HCFC2Q9Y5Z7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms