Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 ACTG1P4-201ENST00000425123 1122 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AC246785.2-201ENST00000432512 513 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AC005336.2-201ENST00000593183 939 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AL592071.1-201ENST00000611956 408 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 HYMAI.1-201ENST00000620949 238 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AD001527.2-201ENST00000622994 785 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 AC132938.5-201ENST00000624980 1813 ntBASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGB1Q9Y5G3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 AC138035.3-201ENST00000622706 2791 ntBASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 AL136038.3-201ENST00000561909 1096 ntBASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 IGHV3-41-201ENST00000613121 348 ntBASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 AC006277.1-201ENST00000624348 1610 ntBASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGB1Q9Y5G3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 SSR4P1-203ENST00000599569 2260 ntBASIC15.15■□□□□ 0.02
PCDHGB1Q9Y5G3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms