Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 AL353705.2-201ENST00000428243 662 ntBASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 AC093724.1-201ENST00000448659 1027 ntBASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 PCGF3-213ENST00000620529 1899 ntBASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 INGX-202ENST00000489074 768 ntBASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AC097493.3-201ENST00000509725 367 ntBASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 MIR3197-201ENST00000582241 73 ntBASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AL158211.3-201ENST00000607385 239 ntBASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AC007967.4-201ENST00000614700 386 ntBASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AL390754.1-201ENST00000619088 582 ntBASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
LINC00588Q9Y4M8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00588Q9Y4M8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms