Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AP000842.3-202ENST00000569238 1080 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AC084121.4-201ENST00000641598 221 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AC134684.3-201ENST00000641758 218 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AF228730.8-201ENST00000642140 221 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 CYP2T1P-202ENST00000641596 2535 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AL589702.1-201ENST00000641229 1509 ntBASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 AC006449.6-201ENST00000612330 2296 ntBASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHA4Q9UN74 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 AC004967.1-201ENST00000453589 447 ntBASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHA4Q9UN74 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms