Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SYNPO2Q9UMS6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 DFFBP1-201ENST00000433250 979 ntBASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AL353779.1-201ENST00000434793 351 ntBASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AC044860.1-202ENST00000559481 777 ntBASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AL662799.1-202ENST00000614205 422 ntBASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AC106886.4-201ENST00000623557 2502 ntBASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SYNPO2Q9UMS6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 AC093004.1-201ENST00000508850 424 ntBASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 AC005225.4-201ENST00000557330 545 ntBASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 AC092337.1-201ENST00000568699 1129 ntBASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SYNPO2Q9UMS6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SYNPO2Q9UMS6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SYNPO2Q9UMS6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SYNPO2Q9UMS6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms