Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH9Q9ULB4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 HMGN1P19-201ENST00000436976 333 ntBASIC17.36■□□□□ 0.37
CDH9Q9ULB4 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.36■□□□□ 0.37
CDH9Q9ULB4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDH9Q9ULB4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 MIR770-201ENST00000390219 98 ntBASIC17.35■□□□□ 0.37
CDH9Q9ULB4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AC092171.3-201ENST00000610122 2651 ntBASIC17.35■□□□□ 0.37
CDH9Q9ULB4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH9Q9ULB4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 MIR943-201ENST00000401286 94 ntBASIC17.34■□□□□ 0.37
CDH9Q9ULB4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH9Q9ULB4 AC069120.2-201ENST00000524091 540 ntBASIC17.34■□□□□ 0.37
CDH9Q9ULB4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms