Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AL391256.1-201ENST00000443260 1855 ntBASIC13.99□□□□□ -0.17
CLN8Q9UBY8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN8Q9UBY8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 LINC00895-201ENST00000629028 1637 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC002056.1-201ENST00000395613 760 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 ACTG1P14-201ENST00000446382 1122 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 ALG1L5P-201ENST00000482043 771 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 MPDU1-223ENST00000582151 728 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AL691403.2-201ENST00000618460 490 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 AC091812.2-201ENST00000619081 385 ntBASIC13.98□□□□□ -0.17
CLN8Q9UBY8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.98□□□□□ -0.17
CLN8Q9UBY8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.97□□□□□ -0.17
CLN8Q9UBY8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CEND1P1-201ENST00000451006 455 ntBASIC13.97□□□□□ -0.17
CLN8Q9UBY8 AC004967.1-201ENST00000453589 447 ntBASIC13.97□□□□□ -0.17
CLN8Q9UBY8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms