Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 MSTO2P-201ENST00000314835 1709 ntBASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 KRT8P37-201ENST00000451609 1420 ntBASIC21.59■■□□□ 1.05
PHRF1Q9P1Y6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PHRF1Q9P1Y6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 AP000812.2-201ENST00000538934 718 ntBASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 PTP4A1P2-201ENST00000546033 454 ntBASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 DUX4L45-201ENST00000566406 1057 ntBASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PHRF1Q9P1Y6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AC012441.1-201ENST00000446669 685 ntBASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AP001889.1-201ENST00000525414 633 ntBASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.57■■□□□ 1.04
PHRF1Q9P1Y6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 AC005252.2-201ENST00000624630 1141 ntBASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 AC005915.1-201ENST00000624912 2018 ntBASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHRF1Q9P1Y6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 TOMM22P5-201ENST00000416399 439 ntBASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 BCRP2-202ENST00000447763 634 ntBASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 BCRP6-201ENST00000510112 632 ntBASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 BCRP7-201ENST00000511549 544 ntBASIC21.55■■□□□ 1.04
PHRF1Q9P1Y6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms