Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NCKIPSDQ9NZQ3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 AC103702.1-201ENST00000548801 2630 ntBASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 AL513523.2-202ENST00000427283 2040 ntBASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.72■□□□□ 0.27
NCKIPSDQ9NZQ3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 AL513480.1-201ENST00000451731 511 ntBASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NCKIPSDQ9NZQ3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
NCKIPSDQ9NZQ3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NCKIPSDQ9NZQ3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NCKIPSDQ9NZQ3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NCKIPSDQ9NZQ3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NCKIPSDQ9NZQ3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AL021920.2-201ENST00000624828 1351 ntBASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AC002056.1-201ENST00000395613 760 ntBASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 DUX4L17-201ENST00000557360 1267 ntBASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 AL513210.1-201ENST00000629608 234 ntBASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC02199-201ENST00000506655 2702 ntBASIC16.7■□□□□ 0.26
NCKIPSDQ9NZQ3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms