Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AL512384.1-201ENST00000406683 331 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 IGHV3-71-201ENST00000523324 359 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC023310.3-201ENST00000557027 670 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC100756.1-201ENST00000562736 682 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC138749.3-201ENST00000567691 622 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AC116165.1-201ENST00000611806 668 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 AL645608.8-201ENST00000606034 2086 ntBASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HCFC1R1Q9NWW0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 PCGF3-213ENST00000620529 1899 ntBASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 AL139010.1-201ENST00000454878 894 ntBASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 GPR53P-205ENST00000457298 1084 ntBASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 SDHAP3-202ENST00000515467 728 ntBASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 TPRX2P-201ENST00000535362 881 ntBASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC1R1Q9NWW0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 AC005622.1-201ENST00000636801 1703 ntBASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC1R1Q9NWW0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms