Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 DOC2GP-202ENST00000514950 1163 ntBASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 AC105021.1-202ENST00000570572 669 ntBASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 AL133215.2-201ENST00000609242 977 ntBASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 AC020765.3-201ENST00000613051 740 ntBASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDLIM7Q9NR12 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 RN7SL837P-201ENST00000463010 287 ntBASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 AL079307.3-201ENST00000556114 283 ntBASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 MIR4259-201ENST00000584466 101 ntBASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.28■□□□□ 0.52
PDLIM7Q9NR12 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 UBALD1-205ENST00000590891 2641 ntBASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.27■□□□□ 0.52
PDLIM7Q9NR12 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.27■□□□□ 0.51
PDLIM7Q9NR12 AC020916.1-201ENST00000587762 1774 ntBASIC18.27■□□□□ 0.51
PDLIM7Q9NR12 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.27■□□□□ 0.51
PDLIM7Q9NR12 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.27■□□□□ 0.51
PDLIM7Q9NR12 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM7Q9NR12 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PDLIM7Q9NR12 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PDLIM7Q9NR12 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms