Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 AC005225.4-201ENST00000557330 545 ntBASIC17.05■□□□□ 0.32
HPS4Q9NQG7 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.05■□□□□ 0.32
HPS4Q9NQG7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 AL138828.2-201ENST00000615812 383 ntBASIC17.05■□□□□ 0.32
HPS4Q9NQG7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 AL671710.1-201ENST00000610245 2349 ntBASIC17.05■□□□□ 0.32
HPS4Q9NQG7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HPS4Q9NQG7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HPS4Q9NQG7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.03■□□□□ 0.32
HPS4Q9NQG7 TUBB7P-202ENST00000428444 1305 ntBASIC17.03■□□□□ 0.32
HPS4Q9NQG7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.03■□□□□ 0.32
HPS4Q9NQG7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 CRB3P1-201ENST00000449338 276 ntBASIC17.03■□□□□ 0.32
HPS4Q9NQG7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.03■□□□□ 0.32
HPS4Q9NQG7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms