Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC40Q9H9A6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 AC104109.2-201ENST00000602919 1418 ntBASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LRRC40Q9H9A6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 AC034105.1-201ENST00000563488 319 ntBASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRC40Q9H9A6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms