Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 SPDYE7P-202ENST00000420373 878 ntBASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 RNA5SP410-201ENST00000516285 106 ntBASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
POLR3FQ9H1D9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 MIR4453-201ENST00000584019 89 ntBASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 AC015911.4-201ENST00000588022 1070 ntBASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 AC093512.1-201ENST00000617969 520 ntBASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
POLR3FQ9H1D9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 TUBB3P1-201ENST00000405796 1332 ntBASIC18.08■□□□□ 0.49
POLR3FQ9H1D9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 POU5F1P6-201ENST00000466990 990 ntBASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 AC018529.1-201ENST00000613063 361 ntBASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.08■□□□□ 0.48
POLR3FQ9H1D9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms