Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 AC025062.2-201ENST00000605477 670 ntBASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHACTR1Q9C0D0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 KRT18P27-201ENST00000427733 1299 ntBASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 MIR3909-201ENST00000579518 119 ntBASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 AC008608.2-201ENST00000606089 416 ntBASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 AL732292.2-201ENST00000609649 430 ntBASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHACTR1Q9C0D0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 U82695.1-201ENST00000635752 1889 ntBASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 AC008677.1-201ENST00000519230 1561 ntBASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 RPS15P9-201ENST00000494093 319 ntBASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 FOSL1P1-201ENST00000511041 816 ntBASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 AC107918.4-202ENST00000641623 219 ntBASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PHACTR1Q9C0D0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms