Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2OQ9C0C9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
UBE2OQ9C0C9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2OQ9C0C9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2OQ9C0C9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 LYSMD4-203ENST00000378904 2122 ntBASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 AC015936.2-201ENST00000593177 259 ntBASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.11■□□□□ 0.49
UBE2OQ9C0C9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 FOXO1B-201ENST00000504678 1527 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 GOLGA2P4-201ENST00000441462 777 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 AL355994.2-201ENST00000447882 704 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 PRYP6-201ENST00000514804 343 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 RN7SL190P-201ENST00000582519 257 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 SRD5A3P1-201ENST00000603021 949 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 AC021097.1-201ENST00000607902 574 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 AL133215.2-201ENST00000609242 977 ntBASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2OQ9C0C9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.09■□□□□ 0.49
UBE2OQ9C0C9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms