Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 UBALD1-205ENST00000590891 2641 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 HMGA1P7-201ENST00000406908 502 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AC092183.1-201ENST00000469884 875 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SNHG9-202ENST00000564014 471 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 MPDU1-223ENST00000582151 728 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AC092902.6-201ENST00000641783 218 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 AL121761.2-201ENST00000598007 1648 ntBASIC11.53□□□□□ -0.56
UPK3BQ9BT76 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK3BQ9BT76 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 AC108860.2-201ENST00000562760 2183 ntBASIC11.52□□□□□ -0.56
UPK3BQ9BT76 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK3BQ9BT76 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK3BQ9BT76 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms