Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 AP002383.4-201ENST00000442518 975 ntBASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 TERC-201ENST00000602385 541 ntBASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 AC010331.1-201ENST00000611423 582 ntBASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 AC116407.4-201ENST00000623319 1061 ntBASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 AC092384.3-202ENST00000564646 2873 ntBASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 AL365203.3-201ENST00000609742 2057 ntBASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.18□□□□□ -0.14
CMSS1Q9BQ75 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 AL590787.1-201ENST00000568856 1315 ntBASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 AC073592.4-201ENST00000623827 446 ntBASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 AC007326.2-201ENST00000624224 7579 ntBASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
CMSS1Q9BQ75 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CMSS1Q9BQ75 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms