Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC10.99□□□□□ -0.65
LITAFQ99732 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC10.99□□□□□ -0.65
LITAFQ99732 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LITAFQ99732 AC090616.6-203ENST00000579186 1945 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
LITAFQ99732 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LITAFQ99732 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
LITAFQ99732 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.98□□□□□ -0.65
LITAFQ99732 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.98□□□□□ -0.65
LITAFQ99732 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
LITAFQ99732 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC10.98□□□□□ -0.65
LITAFQ99732 MIR4492-201ENST00000581627 80 ntBASIC10.98□□□□□ -0.65
LITAFQ99732 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC10.98□□□□□ -0.65
LITAFQ99732 TERC-201ENST00000602385 541 ntBASIC10.98□□□□□ -0.65
LITAFQ99732 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 TOP3BP1-201ENST00000420768 1380 ntBASIC10.98□□□□□ -0.65
LITAFQ99732 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 AL592424.1-201ENST00000563624 1536 ntBASIC10.98□□□□□ -0.65
LITAFQ99732 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LITAFQ99732 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LITAFQ99732 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC10.98□□□□□ -0.65
LITAFQ99732 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 AGAP7P-201ENST00000582299 2062 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 AGAP14-201ENST00000624701 2060 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 NORAD-201ENST00000565493 5339 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LITAFQ99732 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 CICP14-201ENST00000629111 2732 ntBASIC10.97□□□□□ -0.65
LITAFQ99732 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC10.97□□□□□ -0.65
LITAFQ99732 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LITAFQ99732 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
LITAFQ99732 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC10.97□□□□□ -0.65
LITAFQ99732 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms