Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.72■□□□□ 0.11
CGREF1Q99674 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 PMS2P1-201ENST00000431037 1228 ntBASIC15.72■□□□□ 0.11
CGREF1Q99674 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CGREF1Q99674 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.72■□□□□ 0.11
CGREF1Q99674 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.72■□□□□ 0.11
CGREF1Q99674 FAM45BP-202ENST00000592932 1624 ntBASIC15.72■□□□□ 0.11
CGREF1Q99674 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.72■□□□□ 0.11
CGREF1Q99674 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGREF1Q99674 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.71■□□□□ 0.11
CGREF1Q99674 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.71■□□□□ 0.11
CGREF1Q99674 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CGREF1Q99674 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGREF1Q99674 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.71■□□□□ 0.11
CGREF1Q99674 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CGREF1Q99674 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CGREF1Q99674 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.71■□□□□ 0.1
CGREF1Q99674 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CGREF1Q99674 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
CGREF1Q99674 AL122018.1-201ENST00000446607 2310 ntBASIC15.71■□□□□ 0.1
CGREF1Q99674 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CGREF1Q99674 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CGREF1Q99674 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CGREF1Q99674 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.71■□□□□ 0.1
CGREF1Q99674 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CGREF1Q99674 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CGREF1Q99674 AC144831.1-201ENST00000573312 2656 ntBASIC15.71■□□□□ 0.1
CGREF1Q99674 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
CGREF1Q99674 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
CGREF1Q99674 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CGREF1Q99674 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.7■□□□□ 0.1
CGREF1Q99674 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
CGREF1Q99674 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGREF1Q99674 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CGREF1Q99674 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGREF1Q99674 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CGREF1Q99674 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.7■□□□□ 0.1
CGREF1Q99674 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGREF1Q99674 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms