Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 AL161772.1-201ENST00000610494 4412 ntBASIC13.44□□□□□ -0.26
RAB40CQ96S21 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 SNX33P1-201ENST00000592116 1762 ntBASIC13.43□□□□□ -0.26
RAB40CQ96S21 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 MIR648-201ENST00000385046 94 ntBASIC13.43□□□□□ -0.26
RAB40CQ96S21 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 PCDHA3-202ENST00000532566 4594 ntBASIC13.43□□□□□ -0.26
RAB40CQ96S21 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 PCGF3-213ENST00000620529 1899 ntBASIC13.43□□□□□ -0.26
RAB40CQ96S21 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 OR2I1P-209ENST00000641730 5365 ntBASIC13.43□□□□□ -0.26
RAB40CQ96S21 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RAB40CQ96S21 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RAB40CQ96S21 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 REXO1L8P-201ENST00000604378 1897 ntBASIC13.42□□□□□ -0.26
RAB40CQ96S21 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 AC013268.4-201ENST00000637413 2228 ntBASIC13.42□□□□□ -0.26
RAB40CQ96S21 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 LINC00982-205ENST00000420957 435 ntBASIC13.42□□□□□ -0.26
RAB40CQ96S21 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 NTF6B-201ENST00000591913 560 ntBASIC13.42□□□□□ -0.26
RAB40CQ96S21 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.42□□□□□ -0.26
RAB40CQ96S21 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RAB40CQ96S21 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms