Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC46A1Q96NT5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 FAM220BP-201ENST00000377689 816 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 MTND6P24-201ENST00000440466 518 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 IGHV3-71-201ENST00000523324 359 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 SPTSSB-204ENST00000617024 1292 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC46A1Q96NT5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC46A1Q96NT5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC46A1Q96NT5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.71■□□□□ 0.1
SLC46A1Q96NT5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC46A1Q96NT5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC46A1Q96NT5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC46A1Q96NT5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 AC105020.1-201ENST00000435356 2205 ntBASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SLC46A1Q96NT5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 PCDHB17P-201ENST00000539533 2393 ntBASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms