Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AC107918.2-201ENST00000530817 355 ntBASIC17.05■□□□□ 0.32
IFT43Q96FT9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AC091167.2-201ENST00000579581 588 ntBASIC17.05■□□□□ 0.32
IFT43Q96FT9 AC005412.3-201ENST00000580309 715 ntBASIC17.05■□□□□ 0.32
IFT43Q96FT9 MPDU1-223ENST00000582151 728 ntBASIC17.05■□□□□ 0.32
IFT43Q96FT9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 LINC00895-201ENST00000629028 1637 ntBASIC17.05■□□□□ 0.32
IFT43Q96FT9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AL353732.1-201ENST00000569618 1459 ntBASIC17.05■□□□□ 0.32
IFT43Q96FT9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IFT43Q96FT9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 AC006277.1-201ENST00000624348 1610 ntBASIC17.04■□□□□ 0.32
IFT43Q96FT9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
IFT43Q96FT9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IFT43Q96FT9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IFT43Q96FT9 IGLL3P-201ENST00000412472 434 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 PMS2P2-201ENST00000425039 1128 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 RHOQP3-201ENST00000437982 621 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 DNAJB3-202ENST00000449667 1266 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 OR7E47P-204ENST00000575924 449 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 AC013467.2-201ENST00000605472 835 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 AP001350.2-201ENST00000625104 1094 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 AC092865.6-201ENST00000642101 219 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 AC131009.4-201ENST00000624048 1740 ntBASIC17.03■□□□□ 0.32
IFT43Q96FT9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.03■□□□□ 0.32
IFT43Q96FT9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms