Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 RNA5SP419-201ENST00000515908 135 ntBASIC17.46■□□□□ 0.39
TRIM11Q96F44 RNA5SP415-201ENST00000517246 115 ntBASIC17.46■□□□□ 0.39
TRIM11Q96F44 IGHV3-22-201ENST00000520721 359 ntBASIC17.46■□□□□ 0.39
TRIM11Q96F44 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 AL365203.3-201ENST00000609742 2057 ntBASIC17.46■□□□□ 0.39
TRIM11Q96F44 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM11Q96F44 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM11Q96F44 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 TPM4P1-201ENST00000436100 807 ntBASIC17.45■□□□□ 0.38
TRIM11Q96F44 AC079776.4-201ENST00000511039 504 ntBASIC17.45■□□□□ 0.38
TRIM11Q96F44 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 AC109635.5-201ENST00000533593 962 ntBASIC17.45■□□□□ 0.38
TRIM11Q96F44 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 U82695.1-201ENST00000635752 1889 ntBASIC17.45■□□□□ 0.38
TRIM11Q96F44 AL592424.1-201ENST00000563624 1536 ntBASIC17.45■□□□□ 0.38
TRIM11Q96F44 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM11Q96F44 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM11Q96F44 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 AC005622.1-201ENST00000636801 1703 ntBASIC17.44■□□□□ 0.38
TRIM11Q96F44 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 MIR648-201ENST00000385046 94 ntBASIC17.44■□□□□ 0.38
TRIM11Q96F44 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 RHOQP3-201ENST00000437982 621 ntBASIC17.44■□□□□ 0.38
TRIM11Q96F44 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 SLC25A6P4-201ENST00000586535 553 ntBASIC17.44■□□□□ 0.38
TRIM11Q96F44 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 AC010507.1-201ENST00000633895 436 ntBASIC17.44■□□□□ 0.38
TRIM11Q96F44 AC007064.4-201ENST00000637740 555 ntBASIC17.44■□□□□ 0.38
TRIM11Q96F44 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM11Q96F44 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM11Q96F44 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms