Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FUBP1Q96AE4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 KRT18P32-201ENST00000424695 1287 ntBASIC16.47■□□□□ 0.23
FUBP1Q96AE4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 IGHV3-62-201ENST00000520057 340 ntBASIC16.47■□□□□ 0.23
FUBP1Q96AE4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 AL355385.1-201ENST00000606123 409 ntBASIC16.47■□□□□ 0.23
FUBP1Q96AE4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 AC005052.1-201ENST00000625181 2492 ntBASIC16.47■□□□□ 0.23
FUBP1Q96AE4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FUBP1Q96AE4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 AL512652.2-201ENST00000625156 1716 ntBASIC16.46■□□□□ 0.23
FUBP1Q96AE4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 KRT8P23-201ENST00000560090 1207 ntBASIC16.46■□□□□ 0.23
FUBP1Q96AE4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FUBP1Q96AE4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FUBP1Q96AE4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
FUBP1Q96AE4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.46■□□□□ 0.22
FUBP1Q96AE4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms