Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ATP6V0A1Q93050 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATP6V0A1Q93050 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP6V0A1Q93050 GGT3P-204ENST00000453783 1664 ntBASIC18.41■□□□□ 0.54
ATP6V0A1Q93050 AC106886.4-201ENST00000623557 2502 ntBASIC18.41■□□□□ 0.54
ATP6V0A1Q93050 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 AC241585.1-201ENST00000433527 519 ntBASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 AC027369.6-201ENST00000525520 931 ntBASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ATP6V0A1Q93050 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATP6V0A1Q93050 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AC093724.1-201ENST00000448659 1027 ntBASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AC098859.1-201ENST00000502915 1238 ntBASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 SPTSSB-204ENST00000617024 1292 ntBASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AC073592.8-201ENST00000624126 511 ntBASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 FOXO1B-201ENST00000504678 1527 ntBASIC18.39■□□□□ 0.53
ATP6V0A1Q93050 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 LINC01144-201ENST00000626198 1710 ntBASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 HLA-H-201ENST00000383620 1096 ntBASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP6V0A1Q93050 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms