Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 KRT18P28-201ENST00000453838 1332 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 CNN2P2-201ENST00000443536 909 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 CNN2P3-201ENST00000450201 906 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AC010336.2-201ENST00000564226 506 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AL158211.3-201ENST00000607385 239 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AL136317.3-201ENST00000618497 906 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 AC093214.1-201ENST00000511688 1107 ntBASIC16.5■□□□□ 0.23
CHD5Q8TDI0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.5■□□□□ 0.23
CHD5Q8TDI0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AC004890.2-204ENST00000481968 304 ntBASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AC025678.2-201ENST00000562061 970 ntBASIC16.49■□□□□ 0.23
CHD5Q8TDI0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AC004840.1-201ENST00000636359 365 ntBASIC16.49■□□□□ 0.23
CHD5Q8TDI0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.49■□□□□ 0.23
CHD5Q8TDI0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 TUBB3P1-201ENST00000405796 1332 ntBASIC16.49■□□□□ 0.23
CHD5Q8TDI0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 MTND6P24-201ENST00000440466 518 ntBASIC16.49■□□□□ 0.23
CHD5Q8TDI0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.49■□□□□ 0.23
CHD5Q8TDI0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms