Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 TUBB3P1-201ENST00000405796 1332 ntBASIC17.69■□□□□ 0.42
BEST2Q8NFU1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST2Q8NFU1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.68■□□□□ 0.42
BEST2Q8NFU1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.68■□□□□ 0.42
BEST2Q8NFU1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 RNA5SP410-201ENST00000516285 106 ntBASIC17.68■□□□□ 0.42
BEST2Q8NFU1 AC008677.1-201ENST00000519230 1561 ntBASIC17.68■□□□□ 0.42
BEST2Q8NFU1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 AC018529.1-201ENST00000613063 361 ntBASIC17.68■□□□□ 0.42
BEST2Q8NFU1 FLJ38576-201ENST00000623820 2459 ntBASIC17.68■□□□□ 0.42
BEST2Q8NFU1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BEST2Q8NFU1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 AL589702.1-201ENST00000641229 1509 ntBASIC17.67■□□□□ 0.42
BEST2Q8NFU1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 AC005622.1-201ENST00000636801 1703 ntBASIC17.67■□□□□ 0.42
BEST2Q8NFU1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 SPCS2P1-201ENST00000561636 679 ntBASIC17.67■□□□□ 0.42
BEST2Q8NFU1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 LINC02084-201ENST00000606069 1096 ntBASIC17.67■□□□□ 0.42
BEST2Q8NFU1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST2Q8NFU1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
BEST2Q8NFU1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.66■□□□□ 0.42
BEST2Q8NFU1 KLF2P3-201ENST00000451977 1087 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms