Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AC087499.1-201ENST00000418141 1075 ntBASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AC117947.1-201ENST00000427448 529 ntBASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AL353801.3-201ENST00000609898 542 ntBASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AC124864.1-201ENST00000623408 392 ntBASIC14.32□□□□□ -0.12
BEST4Q8NFU0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 AC023908.3-201ENST00000564211 3047 ntBASIC14.32□□□□□ -0.12
BEST4Q8NFU0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
BEST4Q8NFU0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TSPY5P-201ENST00000426936 936 ntBASIC14.31□□□□□ -0.12
BEST4Q8NFU0 AL137013.1-201ENST00000432946 1228 ntBASIC14.31□□□□□ -0.12
BEST4Q8NFU0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 HLA-J-202ENST00000469281 1241 ntBASIC14.31□□□□□ -0.12
BEST4Q8NFU0 RN7SL606P-201ENST00000472779 293 ntBASIC14.31□□□□□ -0.12
BEST4Q8NFU0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 AC011840.4-201ENST00000578471 627 ntBASIC14.31□□□□□ -0.12
BEST4Q8NFU0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 AC132938.5-201ENST00000624980 1813 ntBASIC14.31□□□□□ -0.12
BEST4Q8NFU0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST4Q8NFU0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC023157.3-201ENST00000619086 2088 ntBASIC14.3□□□□□ -0.12
BEST4Q8NFU0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms